Congrats to Viraat for RCMC contributions to a new paper led by KL Kim and Brad Bernstein, where we used RCMC to understand how partial and full loss of a CTCF insulator regulates enhancer-oncogene interaction strength and oncogene expression in GIST cancer. You can find the full paper in Molecular Cell.
A neat part of the paper is Fig. 4C,D which really highlights that the enhancer-promoter vs. expression analysis can be either linear or non-linear (convex) depending on the resolution at which the chromosome conformation capture data is analyzed. |
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